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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6313371_6314872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6313371 - 6314872

Intron Length:

1502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

ACTGTAGTAATG

Flanking Amino Acid:

SLKVLESERARLSLSLEQKE

Intron Amino Acid Position:

1089

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.5

28.5

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

89.5

0.89

0.6

87.9

22.1

Minor 5ss

32.1

-2

3.1

40.5

45.7

Minor BPS

41.2

-0.8

2.2

45.57

41.8

Associated Gene:

Gene:

CEP250

Ensembl Gene ID:

ENSAPLG00000007185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031647

6295764 - 6326653

30890

ENSAPLT00000027821

6294347 - 6326653

32307

ENSAPLT00000021370

6294347 - 6326653

32307

ENSAPLT00000007494

6294347 - 6326953

32607