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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6316184_6316599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6316184 - 6316599

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

AAAGCTTGAAAC

Flanking Amino Acid:

TSRGLVTWNSEQDRVWSLTV

Intron Amino Acid Position:

1251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.9

1.15

0.7

89.3

28.6

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

93.3

0.97

0.6

92.4

17.9

Minor 5ss

-2.8

4.1

39.6

46.4

Minor BPS

47.7

-0.2

1.6

53.28

37.5

Associated Gene:

Gene:

CEP250

Ensembl Gene ID:

ENSAPLG00000007185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021370

6294347 - 6326653

32307

ENSAPLT00000007494

6294347 - 6326953

32607

ENSAPLT00000031647

6295764 - 6326653

30890

ENSAPLT00000027821

6294347 - 6326653

32307