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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6316728_6316992_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6316728 - 6316992

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATATGT

5'SS Class:

major

3'SS Sequence:

TTGCCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

GCTCTGTGAACT

Flanking Amino Acid:

QDLRQTQQDLNDARKKVQDL

Intron Amino Acid Position:

1294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

67.1

38.9

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

81.7

0.71

0.8

73.3

37.1

Minor 5ss

39.9

-1.1

3.1

Minor BPS

47.3

-0.1

2.1

66.64

43.8

Associated Gene:

Gene:

CEP250

Ensembl Gene ID:

ENSAPLG00000007185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031647

6295764 - 6326653

30890

ENSAPLT00000027821

6294347 - 6326653

32307

ENSAPLT00000021370

6294347 - 6326653

32307

ENSAPLT00000007494

6294347 - 6326953

32607