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Intron Name: Anas_platyrhynchos_platyrhynchos_21_631893_637215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

631893 - 637215

Intron Length:

5323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGAATT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTATTTTAAAT

Flanking Amino Acid:

QNEPLPEKPEVNGKEPDDEN

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

80.6

33.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.5

0.6

0.8

74.3

35.9

Minor 5ss

32.6

-2

3.4

47.7

Minor BPS

66.3

0.59

1.4

80.02

35.4

Associated Gene:

Gene:

STAU1

Ensembl Gene ID:

ENSAPLG00000010527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034828

622523 - 642175

19653

ENSAPLT00000011063

622523 - 647387

24865