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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6322870_6323546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6322870 - 6323546

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GTATACCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

GCTCACATAATC

Flanking Amino Acid:

DRDEDRFHLQAIAEGEQLSW

Intron Amino Acid Position:

2542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

44.5

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

62.9

0.29

55.9

39.6

Minor 5ss

39.7

-1.2

3.2

57.4

46.9

Minor BPS

48.5

-0.1

1.8

58.87

39.7

Associated Gene:

Gene:

CEP250

Ensembl Gene ID:

ENSAPLG00000007185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021370

6294347 - 6326653

32307

ENSAPLT00000007494

6294347 - 6326953

32607

ENSAPLT00000031647

6295764 - 6326653

30890

ENSAPLT00000027821

6294347 - 6326653

32307