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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6333028_6334099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6333028 - 6334099

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAATCTTA

5'SS Class:

major

3'SS Sequence:

TGTGCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TAGTAATAAAGA

Flanking Amino Acid:

SCYGAESEDIRCCNTCDDVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

68.2

39.4

Major BPS

70.8

0.52

70.6

31.6

Major PPT

82.7

0.74

0.9

76.8

37.3

Minor 5ss

-0.2

2.8

65.4

45.8

Minor BPS

42.4

-0.5

2.2

54.59

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006927

6332978 - 6354982

22005