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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6334266_6335716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6334266 - 6335716

Intron Length:

1451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CTATCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAAAG

Flanking Amino Acid:

QVYGFLEVNKVAGNFHFAPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.8

0.6

0.8

70.2

30.5

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

48.6

-0.2

64.57

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006927

6332978 - 6354982

22005