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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6358147_6358592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6358147 - 6358592

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GGCCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

CATGCAGCAATG

Flanking Amino Acid:

LLFALHACQQVSVFGFGADS

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

61.8

0.27

0.9

53.7

36.6

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

37.5

-1

2.3

41.52

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018148

6357397 - 6361144

3748

ENSAPLT00000006827

6357979 - 6361563

3585

ENSAPLT00000042824

6357979 - 6361218

3240

ENSAPLT00000039410

6357979 - 6361563

3585

ENSAPLT00000022053

6357397 - 6361389

3993