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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6358713_6359036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6358713 - 6359036

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

TGCAGCTTATTG

Flanking Amino Acid:

KQFIKADRDKVLILNPAFLK

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

69.9

0.45

0.9

68.2

37.4

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

44.7

-0.5

2.1

48.37

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018148

6357397 - 6361144

3748

ENSAPLT00000006827

6357979 - 6361563

3585

ENSAPLT00000042824

6357979 - 6361218

3240

ENSAPLT00000039410

6357979 - 6361563

3585

ENSAPLT00000022053

6357397 - 6361389

3993