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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6359660_6359788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6359660 - 6359788

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

CATTCCTTACGG

Flanking Amino Acid:

PRIDAHDWVLRMNRAKTAGF

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

32.9

Major BPS

68.9

0.47

59.6

38.6

Major PPT

0.54

0.9

65.1

41.2

Minor 5ss

27.5

-2.6

3.4

39.1

46.7

Minor BPS

-0

60.03

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022053

6357397 - 6361389

3993

ENSAPLT00000018148

6357397 - 6361144

3748

ENSAPLT00000006827

6357979 - 6361563

3585

ENSAPLT00000042824

6357979 - 6361218

3240

ENSAPLT00000039410

6357979 - 6361563

3585