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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6360467_6360580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6360467 - 6360580

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CATCTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

CTGCCACCAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

75.5

0.57

0.9

69.2

36.6

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

41.3

-0.6

50.15

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018148

6357397 - 6361144

3748

ENSAPLT00000006827

6357979 - 6361563

3585

ENSAPLT00000022053

6357397 - 6361389

3993