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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6360659_6361479_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

6360659 - 6361479

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GTAACTGTGACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

TGGCCCTGACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.4

41.9

Major BPS

60.1

0.25

35.6

Major PPT

59.2

0.21

1.2

53.3

45.6

Minor 5ss

43.9

-0.7

2.8

58.1

46.5

Minor BPS

53.2

0.18

1.8

71.43

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006827

6357979 - 6361563

3585