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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6360830_6361050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6360830 - 6361050

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCACT

5'SS Class:

major

3'SS Sequence:

TACTGGTGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTTAC

U12 Branch Point Sequence:

AGCCGCTTTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.2

75.3

40.8

Major BPS

56.2

0.16

1.3

51.3

43.9

Major PPT

63.1

0.29

1.1

56.3

43.2

Minor 5ss

47.6

-0.2

2.6

67.7

Minor BPS

47.8

-0

2.1

64.78

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018148

6357397 - 6361144

3748