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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6370458_6370796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6370458 - 6370796

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCAGAT

U12 Branch Point Sequence:

ATTTGCTGACAA

Flanking Amino Acid:

LHIVDFLVQNSGSLEKQTVV

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

61.8

0.29

1.1

58.3

39.2

Major PPT

81.6

0.71

0.8

76.4

32.3

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

46.3

-0.2

2.2

64.02

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006423

6364933 - 6384828

19896