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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6374581_6374997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6374581 - 6374997

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAAGCAC

U12 Branch Point Sequence:

GCCCAGGGAAGC

Flanking Amino Acid:

EDKKCFDLVSYNRTYRFLAE

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

31.3

Major BPS

41.2

-0.5

1.3

43.4

39.2

Major PPT

0.59

72.6

42.4

Minor 5ss

32.3

-2

3.3

46.1

42.2

Minor BPS

26.9

-1.7

2.3

29.77

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006423

6364933 - 6384828

19896