Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_6377103_6378468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6377103 - 6378468

Intron Length:

1366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TGGTACCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

GTTTTGGTACCC

Flanking Amino Acid:

TEKLIPELQSLKTRQDEEKK

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

79.9

34.9

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

70.8

0.47

39.3

Minor 5ss

38.2

-1.3

52.2

44.4

Minor BPS

42.3

-0.6

2.7

61.92

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006423

6364933 - 6384828

19896