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Intron Name: Anas_platyrhynchos_platyrhynchos_21_638242_639654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

638242 - 639654

Intron Length:

1413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATACC

5'SS Class:

major

3'SS Sequence:

CCTTTTCATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCCTTTTCATCT

Flanking Amino Acid:

RPSRSEGKNPDSVTPTVELN

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

73.9

34.7

Major BPS

100

1.24

0.5

100

Major PPT

76.7

0.6

0.8

35.6

Minor 5ss

42.4

-0.8

2.6

55.1

42.2

Minor BPS

49.1

0.01

1.8

66.8

44.7

Associated Gene:

Gene:

STAU1

Ensembl Gene ID:

ENSAPLG00000010527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011063

622523 - 647387

24865

ENSAPLT00000034828

622523 - 642175

19653