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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6396405_6398808_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6396405 - 6398808

Intron Length:

2404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCGTTT

5'SS Class:

weak_major

3'SS Sequence:

GTCTTTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

GATTCTATGATT

Flanking Amino Acid:

EDEHFVGKYKGSFYVYPTVE

Intron Amino Acid Position:

1471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.2

72.1

39.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

82.8

0.74

0.8

77.4

35.6

Minor 5ss

65.1

0.51

2.7

81.8

38.5

Minor BPS

57.5

0.32

1.6

73.53

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005587

6386904 - 6421718

34815