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Intron Name: Anas_platyrhynchos_platyrhynchos_21_639812_641561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

639812 - 641561

Intron Length:

1750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTATTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATTTCTCTATTT

Flanking Amino Acid:

LSEQGPAHSKVFTVQLTLGD

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

64.8

0.33

1.7

36.1

Minor 5ss

-1

59.7

44.8

Minor BPS

56.1

0.27

1.9

78.83

37.8

Associated Gene:

Gene:

STAU1

Ensembl Gene ID:

ENSAPLG00000010527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034828

622523 - 642175

19653

ENSAPLT00000011063

622523 - 647387

24865