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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6404236_6405383_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6404236 - 6405383

Intron Length:

1148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TCCTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATAATTTCACCC

Flanking Amino Acid:

IVNLFNHSKFGSPEFLGQAF

Intron Amino Acid Position:

1104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

76.5

38.6

Major BPS

0.72

78.4

31.2

Major PPT

85.5

0.8

0.7

80.6

24.7

Minor 5ss

41.9

-0.9

2.8

57.5

Minor BPS

45.2

-0.3

1.7

54.07

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005587

6386904 - 6421718

34815