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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6405519_6405925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6405519 - 6405925

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGACCC

5'SS Class:

major

3'SS Sequence:

TCTTTGTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CTGTCTTTGTCT

Flanking Amino Acid:

VFSTYCQTTRTVEETLSPMW

Intron Amino Acid Position:

1059

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

59.5

39.8

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

85.8

0.81

0.8

80.7

31.4

Minor 5ss

27.3

-2.6

2.9

35.8

Minor BPS

45.8

-0.2

3.5

74.14

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005587

6386904 - 6421718

34815