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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6406096_6406666_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6406096 - 6406666

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGGGCAGG

5'SS Class:

weak_major

3'SS Sequence:

TGGCCTGAGGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATGTATTTAATT

Flanking Amino Acid:

LPKEFKYLSERLDQGTVNSL

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.1

1.1

44.3

45.2

Major BPS

90.7

1.01

0.7

19.9

Major PPT

50.7

0.02

1.1

40.6

Minor 5ss

33.2

-1.9

3.1

35.2

42.4

Minor BPS

67.5

0.63

1.4

79.03

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005587

6386904 - 6421718

34815