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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6407258_6408272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6407258 - 6408272

Intron Length:

1015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGCTG

5'SS Class:

major

3'SS Sequence:

AAGTGCTATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGGAT

U12 Branch Point Sequence:

TGCTTCTGGATC

Flanking Amino Acid:

LAKLRFMAQEPPAPCVLGDF

Intron Amino Acid Position:

890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

57.8

46.6

Major BPS

58.9

0.22

1.5

59.3

47.1

Major PPT

63.3

0.3

1.1

55.5

Minor 5ss

32.6

-2

3.7

46.8

48.5

Minor BPS

54.3

0.12

1.5

62.28

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005587

6386904 - 6421718

34815