Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_6411157_6411373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6411157 - 6411373

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

GCCTATATTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TACTCTTTAATG

Flanking Amino Acid:

SKPVSFEVSIGNYGKAEEVV

Intron Amino Acid Position:

707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.8

92.6

23.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

60.5

0.24

1.1

56.6

42.3

Minor 5ss

47.8

-0.2

2.5

68.3

42.6

Minor BPS

71.8

0.55

1.3

68.01

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005587

6386904 - 6421718

34815