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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6412541_6412758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6412541 - 6412758

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGCCT

5'SS Class:

major

3'SS Sequence:

CCTGTCACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TGTGGTGTAATT

Flanking Amino Acid:

LQQISDPGRNGFNPTFGPAW

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

64.8

40.7

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

73.5

0.53

0.9

66.3

34.3

Minor 5ss

28.1

-2.5

3.3

36.8

41.4

Minor BPS

45.2

-0.2

2.4

67.55

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005587

6386904 - 6421718

34815