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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6415699_6415854_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6415699 - 6415854

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCCCAT

U12 Branch Point Sequence:

CATGGCTCAGCT

Flanking Amino Acid:

KSTNCPFYNEYFLFEFHEPR

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

49.3

-0

1.3

58.2

40.4

Major PPT

86.1

0.81

0.6

85.1

22.4

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

43.4

-0.4

2.2

61.11

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005587

6386904 - 6421718

34815