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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6417087_6417361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6417087 - 6417361

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTGTG

5'SS Class:

major

3'SS Sequence:

TTTTTCTGCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAA

U12 Branch Point Sequence:

ACAAGCTCACCC

Flanking Amino Acid:

VSGIVFSPVKSRSRLCSARD

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.2

68.8

42.3

Major BPS

63.2

0.33

1.1

55.1

42.1

Major PPT

83.6

0.76

0.8

80.7

31.3

Minor 5ss

47.9

-0.2

2.9

66.4

45.1

Minor BPS

40.7

-0.7

2.1

46.51

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005587

6386904 - 6421718

34815