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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6427497_6428318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6427497 - 6428318

Intron Length:

822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GTATCTTTGATT

Flanking Amino Acid:

QFVPFQQFKNAPREALSQMV

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.8

34.4

Major BPS

0.87

0.8

85.6

Major PPT

82.9

0.74

0.8

77.1

31.6

Minor 5ss

44.3

-0.6

2.9

62.8

41.9

Minor BPS

71.7

0.77

1.1

80.25

35.7

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004840

6427380 - 6459701

32322

ENSAPLT00000030691

6427131 - 6440877

13747