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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6428556_6429937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6428556 - 6429937

Intron Length:

1382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTCCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGTAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

AHSAQQGTASQYFILLIITD

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

39.3

Major BPS

47.9

-0.1

1.5

45.8

47.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

-2.1

2.9

43.6

43.3

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030691

6427131 - 6440877

13747

ENSAPLT00000004840

6427380 - 6459701

32322