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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6430072_6431848_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6430072 - 6431848

Intron Length:

1777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGCAT

U12 Branch Point Sequence:

TCTTGTGTTACA

Flanking Amino Acid:

NFNPSNPYCQGIQGIVDAYR

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

62.7

0.32

1.4

39.9

Major PPT

81.8

0.72

0.9

75.5

38.3

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

43.9

-0.4

2.5

62.29

44.3

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030691

6427131 - 6440877

13747

ENSAPLT00000004840

6427380 - 6459701

32322