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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6433330_6433430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6433330 - 6433430

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

GGAGGTGTAACG

Flanking Amino Acid:

SGIIRIKSCKIETDYSFLDY

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

80.7

0.69

0.8

73.6

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

39.2

-0.9

2.3

41.05

43.4

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030691

6427131 - 6440877

13747

ENSAPLT00000004840

6427380 - 6459701

32322