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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6433518_6434421_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6433518 - 6434421

Intron Length:

904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCTTT

5'SS Class:

major

3'SS Sequence:

TTGCTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

TGTTCTATTACT

Flanking Amino Acid:

QLQKAGDGSPVEYECIHPEK

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

75.2

37.4

Major BPS

74.6

0.61

65.6

41.4

Major PPT

81.3

0.7

0.8

77.5

31.2

Minor 5ss

44.8

-0.6

3.1

65.3

45.9

Minor BPS

59.5

0.38

1.9

82.04

38.9

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030691

6427131 - 6440877

13747

ENSAPLT00000004840

6427380 - 6459701

32322