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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6434521_6437850_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6434521 - 6437850

Intron Length:

3330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCCT

5'SS Class:

major

3'SS Sequence:

TCTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

ACTTGCCCATTG

Flanking Amino Acid:

CGADFNKPIKVQCADHDSDG

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

60.5

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

88.5

0.87

0.7

80.8

31.2

Minor 5ss

31.7

-2.1

3.6

48.5

47.2

Minor BPS

37.2

-1.1

2.2

42.34

43.1

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030691

6427131 - 6440877

13747

ENSAPLT00000004840

6427380 - 6459701

32322