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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6437941_6438428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6437941 - 6438428

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTATTT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

GMWQLVYRSEVIKNNLNPCW

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

74.4

36.8

Major BPS

72.5

0.56

1.2

39.9

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

42.6

-0.8

3.4

64.9

46.4

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030691

6427131 - 6440877

13747

ENSAPLT00000004840

6427380 - 6459701

32322