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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6438513_6439153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6438513 - 6439153

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGATT

5'SS Class:

major

3'SS Sequence:

GTTTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

GTCTGATGAGTT

Flanking Amino Acid:

EIEARNLDKKDFLGKSDPFL

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

77.1

37.5

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

86.2

0.81

0.8

80.6

Minor 5ss

44.4

-0.6

3.2

66.1

45.1

Minor BPS

-0.6

2.1

58.73

44.4

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030691

6427131 - 6440877

13747

ENSAPLT00000004840

6427380 - 6459701

32322