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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6439226_6439463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6439226 - 6439463

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAATGAC

5'SS Class:

major

3'SS Sequence:

TCCTTTGGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATATATTTATAT

Flanking Amino Acid:

GKPAGKGTITISAEEIKDTR

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

69.5

35.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

71.5

0.48

67.1

38.1

Minor 5ss

32.8

-2

3.3

43.7

44.2

Minor BPS

49.5

0.04

1.8

69.73

40.7

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030691

6427131 - 6440877

13747

ENSAPLT00000004840

6427380 - 6459701

32322