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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6439539_6440310_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6439539 - 6440310

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAGG

5'SS Class:

major

3'SS Sequence:

CTTTTAACCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TGTCTTTTAACC

Flanking Amino Acid:

LGGIECTLGQVVSSSVFTRP

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

65.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

77.5

0.62

0.8

74.9

33.6

Minor 5ss

44.9

-0.6

2.6

57.4

46.9

Minor BPS

72.3

0.68

1.2

76.15

33.5

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030691

6427131 - 6440877

13747

ENSAPLT00000004840

6427380 - 6459701

32322