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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6440491_6440748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6440491 - 6440748

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGAGG

5'SS Class:

major

3'SS Sequence:

TGTGTTTGTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTTCTTCAACT

Flanking Amino Acid:

QDVGGRQWAELDRTERIKNC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

64.5

46.9

Major BPS

78.2

0.7

79.9

32.6

Major PPT

77.6

0.62

72.2

42.7

Minor 5ss

30.6

-2.2

3.3

39.8

45.8

Minor BPS

81.2

1.06

1.4

96.32

29.1

Associated Gene:

Gene:

CPNE1

Ensembl Gene ID:

ENSAPLG00000004619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030691

6427131 - 6440877

13747

ENSAPLT00000004840

6427380 - 6459701

32322