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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6476597_6478176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6476597 - 6478176

Intron Length:

1580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GTTTCTTTGCTA

Flanking Amino Acid:

ACEVAQQEMEYDHKRISQLA

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

68.8

42.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

74.6

0.55

69.7

41.5

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

45.9

-0.3

3.4

70.36

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004080

6471362 - 6485486

14125