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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6478335_6479597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6478335 - 6479597

Intron Length:

1263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

TACCACATAAAT

Flanking Amino Acid:

ISGHKIYGPKGVGAVYVRRR

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

85.4

30.8

Major BPS

62.2

0.3

1.1

68.9

Major PPT

73.2

0.52

74.2

34.3

Minor 5ss

47.8

-0.2

2.5

68.9

41.7

Minor BPS

47.7

-0.1

1.9

66.62

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004080

6471362 - 6485486

14125