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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6482700_6484277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6482700 - 6484277

Intron Length:

1578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTCATGTATT

Flanking Amino Acid:

ATESNNMAIKGVARFYKSRN

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

72.3

37.6

Major BPS

84.8

0.86

85.7

34.9

Major PPT

70.2

0.46

1.1

65.3

41.2

Minor 5ss

31.5

-2.1

3.5

47.6

47.9

Minor BPS

49.5

0.04

2.1

75.09

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004080

6471362 - 6485486

14125