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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6493465_6495662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6493465 - 6495662

Intron Length:

2198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCCTG

5'SS Class:

major

3'SS Sequence:

TTCTGTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTAATAGACT

Flanking Amino Acid:

HIYVDKNSAQGNVYVKCPSI

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

63.8

47.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

82.9

0.74

0.9

77.4

35.6

Minor 5ss

40.4

-1.1

3.3

55.9

48.3

Minor BPS

47.9

-0

2.2

73.33

43.5

Associated Gene:

Gene:

RBM39

Ensembl Gene ID:

ENSAPLG00000003477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034156

6493187 - 6519493

26307

ENSAPLT00000030620

6493187 - 6519493

26307

ENSAPLT00000003602

6493187 - 6519493

26307