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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6503294_6503496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6503294 - 6503496

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTGCCCTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTACAA

U12 Branch Point Sequence:

CTTGCTACAAGG

Flanking Amino Acid:

RLQLMARLAEGTGLQIPPAA

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

79.7

35.3

Major BPS

47.3

-0.1

1.2

54.9

40.8

Major PPT

0.61

0.9

73.1

37.2

Minor 5ss

-0.5

2.5

51.2

45.5

Minor BPS

41.2

-0.8

2.1

47.75

45.8

Associated Gene:

Gene:

RBM39

Ensembl Gene ID:

ENSAPLG00000003477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003602

6493187 - 6519493

26307

ENSAPLT00000034156

6493187 - 6519493

26307

ENSAPLT00000030620

6493187 - 6519493

26307