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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6507933_6509499_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6507933 - 6509499

Intron Length:

1567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCTGAGT

5'SS Class:

weak_major

3'SS Sequence:

TTCTGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATG

Flanking Amino Acid:

KIGLPHSIKLREPIDNLTPE

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.3

58.5

45.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.7

0.83

0.7

84.4

30.6

Minor 5ss

29.3

-2.4

3.2

41.6

44.4

Minor BPS

72.9

0.58

1.2

71.67

35.7

Associated Gene:

Gene:

RBM39

Ensembl Gene ID:

ENSAPLG00000003477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034156

6493187 - 6519493

26307