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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6509394_6509499_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6509394 - 6509499

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCTGAGT

5'SS Class:

weak_major

3'SS Sequence:

AATCTCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTTTGGTTAATC

Flanking Amino Acid:

KIGLPHSIKLSRRRSRSKSP

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.3

58.5

45.6

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

80.1

0.68

0.9

36.4

Minor 5ss

29.3

-2.4

3.2

41.6

44.4

Minor BPS

57.8

0.22

2.4

77.77

38.8

Associated Gene:

Gene:

RBM39

Ensembl Gene ID:

ENSAPLG00000003477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003602

6493187 - 6519493

26307