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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6517599_6519430_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6517599 - 6519430

Intron Length:

1832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CAACCCTGCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTATCAA

U12 Branch Point Sequence:

CTTCTATCAACC

Flanking Amino Acid:

EAMLEAPYKKDENKLSSANG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

66.7

0.42

1.1

69.7

35.6

Major PPT

56.8

0.15

0.9

54.2

35.9

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

49.9

-0

1.8

65.09

40.2

Associated Gene:

Gene:

RBM39

Ensembl Gene ID:

ENSAPLG00000003477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030620

6493187 - 6519493

26307

ENSAPLT00000003602

6493187 - 6519493

26307

ENSAPLT00000034156

6493187 - 6519493

26307