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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6556981_6563869_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6556981 - 6563869

Intron Length:

6889

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCAGGTAGA

5'SS Class:

major

3'SS Sequence:

CAGCCTGTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACCCAC

U12 Branch Point Sequence:

ACACTCCTACCC

Flanking Amino Acid:

DCAAEKRLDTGTKAAMLVKS

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.2

70.2

39.7

Major BPS

54.6

0.11

1.2

64.4

33.8

Major PPT

57.7

0.17

1.1

49.6

43.5

Minor 5ss

22.9

-3.1

3.7

24.1

Minor BPS

44.4

-0.4

1.8

51.38

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003535

6553453 - 6585307

31855