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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6556985_6564026_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6556985 - 6564026

Intron Length:

7042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGAGA

5'SS Class:

major

3'SS Sequence:

CTATGTCCCAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATATAT

U12 Branch Point Sequence:

ATATGCTCAGCC

Flanking Amino Acid:

CAAEKRLDTGSPGAAKQMPA

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.9

43.2

Major BPS

59.1

0.23

1.1

56.7

39.1

Major PPT

49.8

-0

1.7

57.4

38.5

Minor 5ss

29.6

-2.3

3.4

39.5

46.1

Minor BPS

47.2

-0.2

2.1

62.29

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025826

6556383 - 6585307

28925