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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6565147_6569710_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6565147 - 6569710

Intron Length:

4564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCCC

5'SS Class:

major

3'SS Sequence:

CCCCAAGCAGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAG

U12 Branch Point Sequence:

TGGACCCCAAGC

Flanking Amino Acid:

SSGAMRRSSQNSGQPGGCTG

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.2

60.8

44.2

Major BPS

51.1

0.03

1.8

71.4

45.1

Major PPT

-0.4

1.6

39.4

32.4

Minor 5ss

-1.1

54.6

42.5

Minor BPS

-0.5

2.1

53.21

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042950

6553453 - 6585307

31855

ENSAPLT00000003535

6553453 - 6585307

31855