Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_659169_659861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

659169 - 659861

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGAC

5'SS Class:

major

3'SS Sequence:

ATCATATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

TCTATCATATTT

Flanking Amino Acid:

HKLSTACPGRVPSMLSTSLN

Intron Amino Acid Position:

943

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

66.7

39.6

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

66.2

0.37

1.1

68.6

40.8

Minor 5ss

31.1

-2.2

3.4

34.1

42.2

Minor BPS

48.3

-0

1.9

68.89

42.4

Associated Gene:

Gene:

CSE1L

Ensembl Gene ID:

ENSAPLG00000010368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010876

659079 - 678463

19385